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| 22.04.2017 | 10:15 | FK Baník Sokolov | - | FK Fotbal Třinec | 1:0 (1:0) | |
| 12:15 | FC Sellier & Bellot Vlašim | - | FK Varnsdorf | 1:0 (1:0) | ||
| 17:00 | MFK Frýdek-Místek, a.s. | - | FK Pardubice | 0:0 (0:0) | ||
| 17:00 | FK Ústí nad Labem | - | 1. SK Prostějov | 3:0 (1:0) | ||
| 18:00 | Sigma Olomouc | - | MFK Vítkovice | 1:0 (1:0) | ||
| 19:00 | 1. SC Znojmo | - | Viktoria Žižkov | 2:2 (2:2) | ||
| 23.04.2017 | 17:00 | Baník Ostrava | - | FK MAS Táborsko | 1:0 (1:0) | |
| 18:00 | SFC Opava | - | Dynamo České Budějovice | 2:1 (0:0) |
| # | Mannschaft | Sp. | S. | U. | N. | Tore | Dif. | Pk. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Sigma Olomouc | 24 | 18 | 4 | 2 | 50:17 | 33 | 58 |
| 2 |
|
Baník Ostrava | 24 | 14 | 8 | 2 | 38:18 | 20 | 50 |
| 3 |
|
SFC Opava | 24 | 13 | 6 | 5 | 47:28 | 19 | 45 |
| 4 |
|
FC Sellier & Bellot Vlašim | 24 | 11 | 6 | 7 | 40:29 | 11 | 39 |
| 5 |
|
Dynamo České Budějovice | 24 | 10 | 8 | 6 | 31:23 | 8 | 38 |
| 6 |
|
1. SC Znojmo | 24 | 10 | 7 | 7 | 42:35 | 7 | 37 |
| 7 |
|
Viktoria Žižkov | 24 | 9 | 8 | 7 | 44:30 | 14 | 35 |
| 8 |
|
FK MAS Táborsko | 24 | 8 | 7 | 9 | 29:36 | -7 | 31 |
| 9 |
|
FK Ústí nad Labem | 24 | 8 | 5 | 11 | 25:32 | -7 | 29 |
| 10 |
|
FK Fotbal Třinec | 24 | 7 | 7 | 10 | 33:38 | -5 | 28 |
| 11 |
|
MFK Frýdek-Místek, a.s. | 24 | 7 | 7 | 10 | 38:45 | -7 | 28 |
| 12 |
|
FK Varnsdorf | 24 | 7 | 5 | 12 | 32:37 | -5 | 26 |
| 13 |
|
FK Pardubice | 24 | 6 | 8 | 10 | 19:31 | -12 | 26 |
| 14 |
|
FK Baník Sokolov | 24 | 5 | 10 | 9 | 25:37 | -12 | 25 |
| 15 |
|
MFK Vítkovice | 24 | 6 | 3 | 15 | 26:39 | -13 | 21 |
| 16 |
|
1. SK Prostějov | 24 | 2 | 3 | 19 | 18:62 | -44 | 9 |
| Aufstieg | |
| Abstieg |
