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| 12.08.2012 | 11:00 | Tokyo Verdy | - | Kyoto Sanga FC | 0:1 (0:0) | |
| 11:00 | Ventforet Kofu | - | Mito HollyHock | 1:0 (1:0) | ||
| 11:00 | Kataller Toyama | - | Matsumoto Yamaga | 1:2 (1:0) | ||
| 11:00 | Avispa Fukuoka | - | Shonan Bellmare | 1:3 (1:2) | ||
| 11:00 | Oita Trinita | - | Giravanz Kitakyushu | 0:1 (0:0) | ||
| 12:00 | Montedio Yamagata | - | Yokohama FC | 0:1 (0:0) | ||
| 12:00 | Thespakusatsu Gunma | - | FC Gifu | 1:1 (0:0) | ||
| 12:00 | JEF United Chiba | - | FC Machida Zelvia | 0:1 (0:0) | ||
| 12:00 | Gainare Tottori | - | Fagiano Okayama | 0:2 (0:1) | ||
| 12:00 | Ehime FC | - | Tokushima Vortis | 1:2 (0:1) | ||
| 12:00 | Roasso Kumamoto | - | Tochigi SC | 3:0 (1:0) |
| # | Mannschaft | Sp. | S. | U. | N. | Tore | Dif. | Pk. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Ventforet Kofu | 28 | 16 | 8 | 4 | 41:22 | 19 | 56 |
| 2 |
|
Tokyo Verdy | 28 | 17 | 1 | 10 | 49:29 | 20 | 52 |
| 3 |
|
Shonan Bellmare | 28 | 14 | 10 | 4 | 46:29 | 17 | 52 |
| 4 |
|
Kyoto Sanga FC | 28 | 16 | 4 | 8 | 41:29 | 12 | 52 |
| 5 |
|
Oita Trinita | 28 | 15 | 6 | 7 | 42:27 | 15 | 51 |
| 6 |
|
JEF United Chiba | 28 | 15 | 5 | 8 | 40:18 | 22 | 50 |
| 7 |
|
Montedio Yamagata | 28 | 13 | 9 | 6 | 39:28 | 11 | 48 |
| 8 |
|
Yokohama FC | 28 | 14 | 5 | 9 | 42:30 | 12 | 47 |
| 9 |
|
Tochigi SC | 28 | 13 | 6 | 9 | 34:29 | 5 | 45 |
| 10 |
|
Fagiano Okayama | 28 | 11 | 9 | 8 | 24:23 | 1 | 42 |
| 11 |
|
Mito HollyHock | 28 | 10 | 7 | 11 | 30:30 | 0 | 37 |
| 12 |
|
Tokushima Vortis | 28 | 10 | 7 | 11 | 28:30 | -2 | 37 |
| 13 |
|
Giravanz Kitakyushu | 28 | 10 | 6 | 12 | 29:33 | -4 | 36 |
| 14 |
|
Matsumoto Yamaga | 28 | 9 | 9 | 10 | 25:30 | -5 | 36 |
| 15 |
|
Ehime FC | 28 | 8 | 9 | 11 | 35:33 | 2 | 33 |
| 16 |
|
Avispa Fukuoka | 28 | 8 | 9 | 11 | 36:41 | -5 | 33 |
| 17 |
|
Thespakusatsu Gunma | 28 | 8 | 8 | 12 | 22:29 | -7 | 32 |
| 18 |
|
Roasso Kumamoto | 28 | 8 | 8 | 12 | 24:35 | -11 | 32 |
| 19 |
|
FC Gifu | 28 | 4 | 9 | 15 | 16:40 | -24 | 21 |
| 20 |
|
Gainare Tottori | 28 | 6 | 2 | 20 | 21:58 | -37 | 20 |
| 21 |
|
Kataller Toyama | 28 | 3 | 9 | 16 | 22:40 | -18 | 18 |
| 22 |
|
FC Machida Zelvia | 28 | 4 | 6 | 18 | 19:42 | -23 | 18 |
| Aufstieg | |
| Playoffs | |
| Relegation | |
| Abstieg |
