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| 29.03.2013 | 17:30 | Slovan Bratislava | - | 1. FC Tatran Prešov | 5:0 (3:0) | |
| 30.03.2013 | 14:30 | MŠK Žilina | - | Spartak Myjava | 0:0 (0:0) | |
| 14:30 | Spartak Trnava | - | MFK Košice | 2:3 (1:1) | ||
| 14:30 | MFK Ružomberok | - | Zlaté Moravce | 2:1 (1:0) | ||
| 17:30 | FK Senica | - | FK Dukla Banská Bystrica | 1:1 (0:0) | ||
| 17:30 | AS Trenčín | - | FC Nitra | 3:0 (2:0) |
| # | Mannschaft | Sp. | S. | U. | N. | Tore | Dif. | Pk. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Slovan Bratislava | 23 | 14 | 6 | 3 | 43:20 | 23 | 48 |
| 2 |
|
AS Trenčín | 23 | 10 | 8 | 5 | 37:26 | 11 | 38 |
| 3 |
|
MFK Košice | 23 | 11 | 5 | 7 | 33:25 | 8 | 38 |
| 4 |
|
FK Senica | 23 | 10 | 6 | 7 | 29:23 | 6 | 36 |
| 5 |
|
MFK Ružomberok | 23 | 9 | 7 | 7 | 25:25 | 0 | 34 |
| 6 |
|
Zlaté Moravce | 23 | 8 | 7 | 8 | 32:31 | 1 | 31 |
| 7 |
|
MŠK Žilina | 23 | 6 | 12 | 5 | 24:16 | 8 | 30 |
| 8 |
|
Spartak Myjava | 23 | 7 | 6 | 10 | 30:31 | -1 | 27 |
| 9 |
|
FK Dukla Banská Bystrica | 23 | 6 | 9 | 8 | 20:21 | -1 | 27 |
| 10 |
|
1. FC Tatran Prešov | 23 | 6 | 5 | 12 | 16:34 | -18 | 23 |
| 11 |
|
Spartak Trnava | 23 | 5 | 7 | 11 | 21:39 | -18 | 22 |
| 12 |
|
FC Nitra | 23 | 5 | 4 | 14 | 24:43 | -19 | 19 |
| Champions League Quali. | |
| Europa League Quali. | |
| Abstieg |
