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| 27.04.2013 | 14:30 | 1. FC Tatran Prešov | - | FC Nitra | 0:1 (0:0) | |
| 14:30 | MFK Košice | - | Zlaté Moravce | 0:2 (0:1) | ||
| 14:30 | Spartak Trnava | - | AS Trenčín | 2:0 (1:0) | ||
| 14:30 | Slovan Bratislava | - | FK Senica | 3:2 (0:0) | ||
| 17:30 | MŠK Žilina | - | MFK Ružomberok | 3:0 (1:0) | ||
| 20:00 | Spartak Myjava | - | FK Dukla Banská Bystrica | 2:1 (1:0) |
| # | Mannschaft | Sp. | S. | U. | N. | Tore | Dif. | Pk. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Slovan Bratislava | 28 | 15 | 10 | 3 | 49:25 | 24 | 55 |
| 2 |
|
FK Senica | 28 | 13 | 7 | 8 | 36:28 | 8 | 46 |
| 3 |
|
MFK Košice | 28 | 11 | 9 | 8 | 35:29 | 6 | 42 |
| 4 |
|
AS Trenčín | 28 | 10 | 11 | 7 | 39:31 | 8 | 41 |
| 5 |
|
MŠK Žilina | 28 | 8 | 14 | 6 | 31:20 | 11 | 38 |
| 6 |
|
MFK Ružomberok | 28 | 10 | 8 | 10 | 30:37 | -7 | 38 |
| 7 |
|
Spartak Myjava | 28 | 9 | 9 | 10 | 36:35 | 1 | 36 |
| 8 |
|
Zlaté Moravce | 28 | 9 | 8 | 11 | 36:36 | 0 | 35 |
| 9 |
|
FC Nitra | 28 | 9 | 5 | 14 | 33:45 | -12 | 32 |
| 10 |
|
FK Dukla Banská Bystrica | 28 | 7 | 10 | 11 | 25:29 | -4 | 31 |
| 11 |
|
Spartak Trnava | 28 | 6 | 10 | 12 | 27:44 | -17 | 28 |
| 12 |
|
1. FC Tatran Prešov | 28 | 7 | 7 | 14 | 20:38 | -18 | 28 |
| Champions League Quali. | |
| Europa League Quali. | |
| Abstieg |
