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| 03.05.2013 | 18:00 | Vysočina Jihlava | - | FK Dukla Praha | 1:1 (1:0) | |
| 20:15 | Viktoria Plzeň | - | Dynamo České Budějovice | 3:2 (2:0) | ||
| 04.05.2013 | 16:35 | Slovan Liberec | - | AC Sparta Praha | 2:0 (1:0) | |
| 17:00 | Baník Ostrava | - | 1. FK Příbram | 2:0 (1:0) | ||
| 05.05.2013 | 17:00 | FC Hradec Králové | - | 1. FC Slovácko | 2:3 (2:1) | |
| 17:00 | Zbrojovka Brno | - | FK Mladá Boleslav | 1:1 (0:0) | ||
| 18:05 | Slavia Praha | - | FK Baumit Jablonec | 5:1 (3:0) | ||
| 06.05.2013 | 19:00 | Sigma Olomouc | - | FK Teplice | 0:2 (0:0) |
| » Tabelle | Heim | Auswärts | Hinrunde | Rückrunde | 1. Halbzeit | 2. Halbzeit |
| # | Mannschaft | Sp. | S. | U. | N. | Tore | Dif. | Pk. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Viktoria Plzeň | 26 | 18 | 5 | 3 | 49:18 | 31 | 59 |
| 2 |
|
AC Sparta Praha | 26 | 16 | 6 | 4 | 43:20 | 23 | 54 |
| 3 |
|
Slovan Liberec | 26 | 13 | 5 | 8 | 37:31 | 6 | 44 |
| 4 |
|
Sigma Olomouc | 26 | 11 | 8 | 7 | 34:26 | 8 | 41 |
| 5 |
|
FK Baumit Jablonec | 26 | 11 | 8 | 7 | 44:38 | 6 | 41 |
| 6 |
|
FK Dukla Praha | 26 | 9 | 12 | 5 | 41:29 | 12 | 39 |
| 7 |
|
FK Mladá Boleslav | 26 | 10 | 7 | 9 | 32:32 | 0 | 37 |
| 8 |
|
Slavia Praha | 26 | 8 | 9 | 9 | 33:30 | 3 | 33 |
| 9 |
|
Vysočina Jihlava | 26 | 6 | 13 | 7 | 30:37 | -7 | 31 |
| 10 |
|
1. FC Slovácko | 26 | 8 | 6 | 12 | 31:36 | -5 | 30 |
| 11 |
|
Zbrojovka Brno | 26 | 8 | 5 | 13 | 28:43 | -15 | 29 |
| 12 |
|
Baník Ostrava | 26 | 7 | 7 | 12 | 30:36 | -6 | 28 |
| 13 |
|
1. FK Příbram | 26 | 6 | 9 | 11 | 24:36 | -12 | 27 |
| 14 |
|
FK Teplice | 26 | 6 | 8 | 12 | 28:39 | -11 | 26 |
| 15 |
|
FC Hradec Králové | 26 | 5 | 9 | 12 | 27:37 | -10 | 24 |
| 16 |
|
Dynamo České Budějovice | 26 | 5 | 5 | 16 | 21:44 | -23 | 20 |
| Champions League Quali. | |
| Europa League Quali. | |
| Abstieg |
