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| # | Mannschaft | Sp. | S. | U. | N. | Tore | Dif. | Pk. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
1. FC Köln | 28 | 16 | 5 | 7 | 46:22 | 24 | 53 |
| 2 |
|
SC Paderborn 07 | 28 | 13 | 7 | 8 | 42:27 | 15 | 46 |
| 3 |
|
Holstein Kiel | 28 | 12 | 9 | 7 | 32:23 | 9 | 45 |
| 4 |
|
Hamburger SV | 28 | 11 | 11 | 6 | 22:20 | 2 | 44 |
| 5 |
|
Jahn Regensburg | 28 | 11 | 10 | 7 | 23:17 | 6 | 43 |
| 6 |
|
1. FC Union Berlin | 28 | 11 | 10 | 7 | 23:18 | 5 | 43 |
| 7 |
|
FC St. Pauli | 28 | 12 | 5 | 11 | 23:26 | -3 | 41 |
| 8 |
|
1. FC Heidenheim 1846 | 28 | 8 | 15 | 5 | 21:16 | 5 | 39 |
| 9 |
|
SV Darmstadt 98 | 28 | 10 | 9 | 9 | 27:29 | -2 | 39 |
| 10 |
|
SpVgg Greuther Fürth | 28 | 9 | 9 | 10 | 26:29 | -3 | 36 |
| 11 |
|
VfL Bochum | 28 | 10 | 6 | 12 | 21:25 | -4 | 36 |
| 12 |
|
Arminia Bielefeld | 28 | 8 | 11 | 9 | 24:26 | -2 | 35 |
| 13 |
|
Erzgebirge Aue | 28 | 8 | 10 | 10 | 19:23 | -4 | 34 |
| 14 |
|
Dynamo Dresden | 28 | 7 | 13 | 8 | 15:21 | -6 | 34 |
| 15 |
|
SV Sandhausen | 28 | 7 | 8 | 13 | 19:23 | -4 | 29 |
| 16 |
|
MSV Duisburg | 28 | 7 | 8 | 13 | 19:33 | -14 | 29 |
| 17 |
|
1. FC Magdeburg | 28 | 6 | 8 | 14 | 17:26 | -9 | 26 |
| 18 |
|
FC Ingolstadt 04 | 28 | 4 | 10 | 14 | 19:34 | -15 | 22 |
| Aufstieg | |
| Relegation | |
| Relegation | |
| Abstieg |
