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| # | Mannschaft | Sp. | S. | U. | N. | Tore | Dif. | Pk. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
FC Ingolstadt 04 II | 25 | 12 | 10 | 3 | 24:11 | 13 | 46 |
| 2 |
|
Wacker Burghausen | 25 | 10 | 14 | 1 | 14:5 | 9 | 44 |
| 3 |
|
Jahn Regensburg | 25 | 10 | 11 | 4 | 24:15 | 9 | 41 |
| 4 |
|
Bayern München II | 25 | 9 | 11 | 5 | 22:11 | 11 | 38 |
| 5 |
|
FV Illertissen | 25 | 9 | 10 | 6 | 21:14 | 7 | 37 |
| 6 |
|
SpVgg Bayreuth | 25 | 9 | 10 | 6 | 21:17 | 4 | 37 |
| 7 |
|
SpVgg Unterhaching | 25 | 9 | 9 | 7 | 22:13 | 9 | 36 |
| 8 |
|
1. FC Nürnberg II | 25 | 9 | 8 | 8 | 18:19 | -1 | 35 |
| 9 |
|
FC Amberg | 25 | 7 | 13 | 5 | 15:11 | 4 | 34 |
| 10 |
|
TSV 1860 München II | 25 | 7 | 10 | 8 | 13:9 | 4 | 31 |
| 11 |
|
TSV 1896 Rain | 25 | 8 | 7 | 10 | 17:21 | -4 | 31 |
| 12 |
|
FC Augsburg II | 25 | 6 | 10 | 9 | 16:27 | -11 | 28 |
| 13 |
|
Viktoria Aschaffenburg | 25 | 6 | 9 | 10 | 14:24 | -10 | 27 |
| 14 |
|
SpVgg Greuther Fürth II | 25 | 5 | 10 | 10 | 16:23 | -7 | 25 |
| 15 |
|
FC Memmingen | 25 | 6 | 7 | 12 | 12:20 | -8 | 25 |
| 16 |
|
1. FC Schweinfurt 05 | 25 | 3 | 14 | 8 | 11:18 | -7 | 23 |
| 17 |
|
SV Schalding-Heining | 25 | 3 | 14 | 8 | 9:17 | -8 | 23 |
| 18 |
|
TSV Buchbach | 25 | 2 | 13 | 10 | 10:24 | -14 | 19 |
| Playoffs | |
| Relegation | |
| Abstieg |
