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| # | Mannschaft | Sp. | S. | U. | N. | Tore | Dif. | Pk. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
Wacker Burghausen | 32 | 13 | 18 | 1 | 20:7 | 13 | 57 |
| 2 |
|
FC Ingolstadt 04 II | 32 | 14 | 12 | 6 | 29:20 | 9 | 54 |
| 3 |
|
FV Illertissen | 32 | 13 | 13 | 6 | 27:14 | 13 | 52 |
| 4 |
|
Jahn Regensburg | 32 | 12 | 14 | 6 | 27:18 | 9 | 50 |
| 5 |
|
SpVgg Unterhaching | 32 | 13 | 10 | 9 | 29:18 | 11 | 49 |
| 6 |
|
SpVgg Bayreuth | 32 | 11 | 14 | 7 | 25:20 | 5 | 47 |
| 7 |
|
1. FC Nürnberg II | 32 | 12 | 11 | 9 | 23:22 | 1 | 47 |
| 8 |
|
Bayern München II | 32 | 11 | 12 | 9 | 27:16 | 11 | 45 |
| 9 |
|
SpVgg Greuther Fürth II | 32 | 10 | 10 | 12 | 25:26 | -1 | 40 |
| 10 |
|
TSV 1860 München II | 32 | 9 | 12 | 11 | 18:15 | 3 | 39 |
| 11 |
|
FC Amberg | 32 | 8 | 15 | 9 | 16:16 | 0 | 39 |
| 12 |
|
Viktoria Aschaffenburg | 32 | 8 | 13 | 11 | 16:26 | -10 | 37 |
| 13 |
|
TSV 1896 Rain | 32 | 8 | 11 | 13 | 18:26 | -8 | 35 |
| 14 |
|
1. FC Schweinfurt 05 | 32 | 5 | 19 | 8 | 15:19 | -4 | 34 |
| 15 |
|
FC Augsburg II | 32 | 6 | 16 | 10 | 19:32 | -13 | 34 |
| 16 |
|
FC Memmingen | 32 | 6 | 11 | 15 | 15:26 | -11 | 29 |
| 17 |
|
SV Schalding-Heining | 32 | 4 | 17 | 11 | 12:24 | -12 | 29 |
| 18 |
|
TSV Buchbach | 32 | 2 | 18 | 12 | 10:26 | -16 | 24 |
| Playoffs | |
| Relegation | |
| Abstieg |
