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| 15.07.2012 | 11:00 | Tochigi SC | - | FC Machida Zelvia | 1:0 (0:0) | |
| 11:00 | Tokyo Verdy | - | Gainare Tottori | 1:0 (0:0) | ||
| 11:00 | Yokohama FC | - | JEF United Chiba | 0:1 (0:1) | ||
| 11:00 | Ventforet Kofu | - | Matsumoto Yamaga | 2:1 (1:0) | ||
| 11:00 | Giravanz Kitakyushu | - | Thespakusatsu Gunma | 0:1 (0:0) | ||
| 11:00 | Oita Trinita | - | Shonan Bellmare | 1:4 (1:3) | ||
| 12:00 | Montedio Yamagata | - | Avispa Fukuoka | 3:1 (1:0) | ||
| 12:00 | FC Gifu | - | Kataller Toyama | 2:2 (1:1) | ||
| 12:00 | Fagiano Okayama | - | Tokushima Vortis | 0:0 (0:0) | ||
| 12:00 | Ehime FC | - | Mito HollyHock | 1:1 (0:0) | ||
| 12:00 | Roasso Kumamoto | - | Kyoto Sanga FC | 0:1 (0:0) |
| # | Mannschaft | Sp. | S. | U. | N. | Tore | Dif. | Pk. | |
|---|---|---|---|---|---|---|---|---|---|
| 1 |
|
JEF United Chiba | 24 | 14 | 4 | 6 | 39:16 | 23 | 46 |
| 2 |
|
Tokyo Verdy | 24 | 15 | 1 | 8 | 45:25 | 20 | 46 |
| 3 |
|
Shonan Bellmare | 24 | 12 | 9 | 3 | 42:27 | 15 | 45 |
| 4 |
|
Montedio Yamagata | 24 | 13 | 6 | 5 | 36:24 | 12 | 45 |
| 5 |
|
Ventforet Kofu | 24 | 12 | 8 | 4 | 34:20 | 14 | 44 |
| 6 |
|
Oita Trinita | 24 | 13 | 5 | 6 | 34:23 | 11 | 44 |
| 7 |
|
Kyoto Sanga FC | 24 | 12 | 4 | 8 | 33:26 | 7 | 40 |
| 8 |
|
Tochigi SC | 24 | 11 | 5 | 8 | 31:25 | 6 | 38 |
| 9 |
|
Yokohama FC | 24 | 11 | 4 | 9 | 37:29 | 8 | 37 |
| 10 |
|
Fagiano Okayama | 24 | 9 | 9 | 6 | 20:19 | 1 | 36 |
| 11 |
|
Mito HollyHock | 24 | 9 | 6 | 9 | 24:24 | 0 | 33 |
| 12 |
|
Ehime FC | 24 | 8 | 8 | 8 | 31:26 | 5 | 32 |
| 13 |
|
Giravanz Kitakyushu | 24 | 9 | 4 | 11 | 26:30 | -4 | 31 |
| 14 |
|
Avispa Fukuoka | 24 | 7 | 9 | 8 | 30:31 | -1 | 30 |
| 15 |
|
Tokushima Vortis | 24 | 8 | 6 | 10 | 22:24 | -2 | 30 |
| 16 |
|
Roasso Kumamoto | 24 | 7 | 8 | 9 | 21:28 | -7 | 29 |
| 17 |
|
Matsumoto Yamaga | 24 | 7 | 7 | 10 | 18:27 | -9 | 28 |
| 18 |
|
Thespakusatsu Gunma | 24 | 7 | 6 | 11 | 16:25 | -9 | 27 |
| 19 |
|
FC Gifu | 24 | 4 | 7 | 13 | 13:33 | -20 | 19 |
| 20 |
|
Kataller Toyama | 24 | 3 | 8 | 13 | 20:35 | -15 | 17 |
| 21 |
|
Gainare Tottori | 24 | 5 | 2 | 17 | 18:50 | -32 | 17 |
| 22 |
|
FC Machida Zelvia | 24 | 3 | 4 | 17 | 15:38 | -23 | 13 |
| Aufstieg | |
| Playoffs | |
| Relegation | |
| Abstieg |
